#include <H5PartWrapperForPT.h>

Inheritance diagram for H5PartWrapperForPT:

Collaboration diagram for H5PartWrapperForPT:

Public Member Functions
	H5PartWrapperForPT (const std::string &fileName, h5_int32_t flags=H5_O_WRONLY)
	H5PartWrapperForPT (const std::string &fileName, int restartStep, std::string sourceFile, h5_int32_t flags=H5_O_RDWR)
virtual	~H5PartWrapperForPT ()
virtual void	readHeader ()
virtual void	readStep (PartBunch_t *, h5_ssize_t firstParticle, h5_ssize_t lastParticle)
virtual void	writeHeader ()
virtual void	writeStep (PartBunch_t *, const std::map< std::string, double > &additionalStepAttributes)
virtual bool	predecessorIsSameFlavour () const
void	close ()
double	getLastPosition ()
void	storeCavityInformation ()
size_t	getNumParticles () const

Protected Member Functions
void	open (h5_int32_t flags)
void	copyFile (const std::string &sourceFile, int lastStep=-1, h5_int32_t flags=H5_O_WRONLY)
void	copyFileSystem (const std::string &sourceFile)
void	copyHeader (h5_file_t source)
void	copyStep (h5_file_t source, int step)
void	copyStepHeader (h5_file_t source)
void	copyStepData (h5_file_t source)
void	sendFailureMessage (bool failed, const std::string &where, const std::string &what)
void	receiveFailureMessage (int sourceNode, const std::string &where, const std::string &what)

Static Protected Member Functions
static void	reportOnError (h5_int64_t rc, const char *file, int line)

Protected Attributes
h5_file_t	file_m
std::string	fileName_m
std::string	predecessorOPALFlavour_m
h5_int64_t	numSteps_m
bool	startedFromExistingFile_m

Static Protected Attributes
static std::string	copyFilePrefix_m = ".copy"

Private Member Functions
void	readStepHeader (PartBunch_t *)
void	readStepData (PartBunch_t *, h5_ssize_t, h5_ssize_t)
void	writeStepHeader (PartBunch_t *, const std::map< std::string, double > &)
void	writeStepData (PartBunch_t *)

Detailed Description

Definition at line 26 of file H5PartWrapperForPT.h.

Constructor & Destructor Documentation

◆ H5PartWrapperForPT() [1/2]

H5PartWrapperForPT::H5PartWrapperForPT	(	const std::string &	fileName,
		h5_int32_t	flags = H5_O_WRONLY )

Definition at line 35 of file H5PartWrapperForPT.cpp.

References H5PartWrapper::H5PartWrapper().

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◆ H5PartWrapperForPT() [2/2]

H5PartWrapperForPT::H5PartWrapperForPT	(	const std::string &	fileName,
		int	restartStep,
		std::string	sourceFile,
		h5_int32_t	flags = H5_O_RDWR )

Definition at line 39 of file H5PartWrapperForPT.cpp.

References H5PartWrapper::file_m, OpalData::getInstance(), H5PartWrapper::H5PartWrapper(), and OpalData::setRestartStep().

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◆ ~H5PartWrapperForPT()

H5PartWrapperForPT::~H5PartWrapperForPT ( )

virtual

Definition at line 48 of file H5PartWrapperForPT.cpp.

Member Function Documentation

◆ close()

void H5PartWrapper::close ( )

inherited

Definition at line 59 of file H5PartWrapper.cpp.

References file_m, and REPORTONERROR.

Referenced by copyFile(), H5Writer::H5Writer(), storeCavityInformation(), H5PartWrapperForPT::writeStep(), and ~H5PartWrapper().

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◆ copyFile()

void H5PartWrapper::copyFile	(	const std::string &	sourceFile,
		int	lastStep = -1,
		h5_int32_t	flags = H5_O_WRONLY )

protectedinherited

Definition at line 129 of file H5PartWrapper.cpp.

References close(), copyFilePrefix_m, copyFileSystem(), copyHeader(), copyStep(), fileName_m, numSteps_m, open(), predecessorOPALFlavour_m, READSTEPATTRIB, and REPORTONERROR.

Referenced by H5PartWrapper().

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◆ copyFileSystem()

void H5PartWrapper::copyFileSystem ( const std::string & sourceFile )

protectedinherited

Definition at line 252 of file H5PartWrapper.cpp.

References fileName_m, receiveFailureMessage(), and sendFailureMessage().

Referenced by copyFile().

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◆ copyHeader()

void H5PartWrapper::copyHeader ( h5_file_t source )

protectedinherited

Definition at line 288 of file H5PartWrapper.cpp.

References file_m, READFILEATTRIB, REPORTONERROR, WRITEFILEATTRIB, and WRITESTRINGFILEATTRIB.

Referenced by copyFile().

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◆ copyStep()

void H5PartWrapper::copyStep	(	h5_file_t	source,
		int	step )

protectedinherited

Definition at line 352 of file H5PartWrapper.cpp.

References copyStepData(), copyStepHeader(), file_m, numSteps_m, and REPORTONERROR.

Referenced by copyFile().

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◆ copyStepData()

void H5PartWrapper::copyStepData ( h5_file_t source )

protectedinherited

Definition at line 429 of file H5PartWrapper.cpp.

References Util::c_data(), file_m, READDATA, REPORTONERROR, and WRITEDATA.

Referenced by copyStep().

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◆ copyStepHeader()

void H5PartWrapper::copyStepHeader ( h5_file_t source )

protectedinherited

Definition at line 360 of file H5PartWrapper.cpp.

References file_m, predecessorOPALFlavour_m, READSTEPATTRIB, REPORTONERROR, WRITESTEPATTRIB, and WRITESTRINGSTEPATTRIB.

Referenced by copyStep().

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◆ getLastPosition()

double H5PartWrapper::getLastPosition ( )

inlineinherited

Definition at line 90 of file H5PartWrapper.h.

References file_m, open(), readStep(), READSTEPATTRIB, and REPORTONERROR.

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◆ getNumParticles()

size_t H5PartWrapper::getNumParticles ( ) const

inherited

Definition at line 508 of file H5PartWrapper.cpp.

References file_m, numSteps_m, and REPORTONERROR.

Referenced by H5PartWrapperForPT::readStepData().

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◆ open()

void H5PartWrapper::open ( h5_int32_t flags )

protectedinherited

Definition at line 69 of file H5PartWrapper.cpp.

References file_m, and fileName_m.

Referenced by copyFile(), getLastPosition(), H5PartWrapper(), H5PartWrapper(), storeCavityInformation(), and H5PartWrapperForPT::writeStep().

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◆ predecessorIsSameFlavour()

bool H5PartWrapperForPT::predecessorIsSameFlavour ( ) const

inlinevirtual

Implements H5PartWrapper.

Definition at line 51 of file H5PartWrapperForPT.h.

References H5PartWrapper::predecessorOPALFlavour_m.

◆ readHeader()

void H5PartWrapperForPT::readHeader ( )

virtual

Implements H5PartWrapper.

Definition at line 51 of file H5PartWrapperForPT.cpp.

References H5PartWrapper::file_m, OpalData::getInstance(), READFILEATTRIB, REPORTONERROR, OpalData::setGlobalPhaseShift(), and OpalData::setRestartDumpFreq().

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◆ readStep()

void H5PartWrapperForPT::readStep	(	PartBunch_t *	bunch,
		h5_ssize_t	firstParticle,
		h5_ssize_t	lastParticle )

virtual

Implements H5PartWrapper.

Definition at line 102 of file H5PartWrapperForPT.cpp.

References H5PartWrapper::file_m, readStep(), readStepData(), readStepHeader(), and REPORTONERROR.

Referenced by readStep().

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◆ readStepData()

void H5PartWrapperForPT::readStepData	(	PartBunch_t *	bunch,
		h5_ssize_t	firstParticle,
		h5_ssize_t	lastParticle )

private

Definition at line 147 of file H5PartWrapperForPT.cpp.

References Util::c_data(), H5PartWrapper::file_m, H5PartWrapper::getNumParticles(), READDATA, and REPORTONERROR.

Referenced by readStep().

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◆ readStepHeader()

void H5PartWrapperForPT::readStepHeader ( PartBunch_t * bunch )

private

Definition at line 112 of file H5PartWrapperForPT.cpp.

References H5PartWrapper::file_m, READSTEPATTRIB, PartBunch< PLayout, T, Dim >::RefPartP_m, PartBunch< PLayout, T, Dim >::RefPartR_m, PartBunch< PLayout, T, Dim >::set_sPos(), PartBunch< PLayout, T, Dim >::setGlobalTrackStep(), PartBunch< PLayout, T, Dim >::setLocalTrackStep(), and PartBunch< PLayout, T, Dim >::setT().

Referenced by readStep().

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◆ receiveFailureMessage()

void H5PartWrapper::receiveFailureMessage	(	int	sourceNode,
		const std::string &	where,
		const std::string &	what )

protectedinherited

Definition at line 495 of file H5PartWrapper.cpp.

Referenced by copyFileSystem().

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◆ reportOnError()

void H5PartWrapper::reportOnError	(	h5_int64_t	rc,
		const char *	file,
		int	line )

inlinestaticprotectedinherited

Definition at line 85 of file H5PartWrapper.h.

◆ sendFailureMessage()

void H5PartWrapper::sendFailureMessage	(	bool	failed,
		const std::string &	where,
		const std::string &	what )

protectedinherited

Definition at line 483 of file H5PartWrapper.cpp.

Referenced by copyFileSystem().

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◆ storeCavityInformation()

void H5PartWrapper::storeCavityInformation ( )

inherited

Write number of Cavities with autophase information

Definition at line 82 of file H5PartWrapper.cpp.

References close(), end(), file_m, OpalData::getFirstMaxPhases(), OpalData::getInstance(), OpalData::getLastMaxPhases(), OpalData::getNumberOfMaxPhases(), open(), WRITEFILEATTRIB, and WRITESTRINGFILEATTRIB.

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◆ writeHeader()

void H5PartWrapperForPT::writeHeader ( )

virtual

Write file dump frequency.

Write global phase change

Implements H5PartWrapper.

Definition at line 209 of file H5PartWrapperForPT.cpp.

References Options::ebDump, H5PartWrapper::file_m, Util::getGitRevision(), OpalData::getGlobalPhaseShift(), OpalData::getInstance(), OPAL_PROJECT_NAME, OPAL_PROJECT_VERSION, Options::psDumpFreq, Options::rhoDump, WRITEFILEATTRIB, and WRITESTRINGFILEATTRIB.

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◆ writeStep()

void H5PartWrapperForPT::writeStep	(	PartBunch_t *	bunch,
		const std::map< std::string, double > &	additionalStepAttributes )

virtual

Implements H5PartWrapper.

Definition at line 292 of file H5PartWrapperForPT.cpp.

References PartBunch< PLayout, T, Dim >::calcBeamParameters(), H5PartWrapper::close(), PartBunch< PLayout, T, Dim >::getTotalNum(), H5PartWrapper::open(), writeStepData(), and writeStepHeader().

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◆ writeStepData()

void H5PartWrapperForPT::writeStepData ( PartBunch_t * bunch )

private

Definition at line 410 of file H5PartWrapperForPT.cpp.

References Util::c_data(), Options::ebDump, H5PartWrapper::file_m, PartBunch< PLayout, T, Dim >::getLocalNum(), PartBunch< PLayout, T, Dim >::getParticleContainer(), REPORTONERROR, and WRITEDATA.

Referenced by writeStep().

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◆ writeStepHeader()

void H5PartWrapperForPT::writeStepHeader	(	PartBunch_t *	bunch,
		const std::map< std::string, double > &	additionalStepAttributes )

private

Write particle mass and charge per particle. (Consider making these file attributes.)

Definition at line 305 of file H5PartWrapperForPT.cpp.

Referenced by writeStep().

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Member Data Documentation

◆ copyFilePrefix_m

std::string H5PartWrapper::copyFilePrefix_m = ".copy"

staticprotectedinherited

Definition at line 82 of file H5PartWrapper.h.

Referenced by copyFile().

◆ file_m

h5_file_t H5PartWrapper::file_m

protectedinherited

◆ fileName_m

std::string H5PartWrapper::fileName_m

protectedinherited

Definition at line 77 of file H5PartWrapper.h.

Referenced by copyFile(), copyFileSystem(), H5PartWrapper(), H5PartWrapper(), and open().

◆ numSteps_m

h5_int64_t H5PartWrapper::numSteps_m

protectedinherited

Definition at line 79 of file H5PartWrapper.h.

Referenced by copyFile(), copyStep(), getNumParticles(), H5PartWrapper(), H5PartWrapper(), and H5PartWrapperForPT::writeStepHeader().

◆ predecessorOPALFlavour_m

std::string H5PartWrapper::predecessorOPALFlavour_m

protectedinherited

Definition at line 78 of file H5PartWrapper.h.

Referenced by copyFile(), copyStepHeader(), H5PartWrapper(), H5PartWrapper(), and H5PartWrapperForPT::predecessorIsSameFlavour().

◆ startedFromExistingFile_m

bool H5PartWrapper::startedFromExistingFile_m

protectedinherited

Definition at line 80 of file H5PartWrapper.h.

Referenced by H5PartWrapper(), and H5PartWrapper().

The documentation for this class was generated from the following files:

Public Member Functions

Protected Member Functions

Static Protected Member Functions

Protected Attributes

Static Protected Attributes

Private Member Functions

Detailed Description

Constructor & Destructor Documentation

◆ H5PartWrapperForPT() [1/2]

◆ H5PartWrapperForPT() [2/2]

◆ ~H5PartWrapperForPT()

Member Function Documentation

◆ close()

◆ copyFile()

◆ copyFileSystem()

◆ copyHeader()

◆ copyStep()

◆ copyStepData()

◆ copyStepHeader()

◆ getLastPosition()

◆ getNumParticles()

◆ open()

◆ predecessorIsSameFlavour()

◆ readHeader()

◆ readStep()

◆ readStepData()

◆ readStepHeader()

◆ receiveFailureMessage()

◆ reportOnError()

◆ sendFailureMessage()

◆ storeCavityInformation()

◆ writeHeader()

◆ writeStep()

◆ writeStepData()

◆ writeStepHeader()

Member Data Documentation

◆ copyFilePrefix_m

◆ file_m

◆ fileName_m

◆ numSteps_m

◆ predecessorOPALFlavour_m

◆ startedFromExistingFile_m