AmrYtWriter Class Reference

#include <AmrYtWriter.h>

Inheritance diagram for AmrYtWriter:

Collaboration diagram for AmrYtWriter:

Public Member Functions
	AmrYtWriter (int step, int bin=0)
void	writeFields (const amr::AmrScalarFieldContainer_t &rho, const amr::AmrScalarFieldContainer_t &phi, const amr::AmrVectorFieldContainer_t &efield, const amr::AmrIntArray_t &refRatio, const amr::AmrGeomContainer_t &geom, const int &nLevel, const double &time, const double &scale)
void	writeBunch (const AmrPartBunch *bunch_p, const double &time, const double &gamma)

Private Member Functions
void	writeParticles_m (int level, std::ofstream &ofs, int fnum, amrex::Vector< int > &which, amrex::Vector< int > &count, amrex::Vector< long > &where, const AmrPartBunch *bunch_p, const double gamma) const

Private Attributes
std::string	dir_m
	directory where to write files
std::vector< std::string >	intData_m
	integer bunch data
std::vector< std::string >	realData_m
	real bunch data

Detailed Description

Definition at line 32 of file AmrYtWriter.h.

Constructor & Destructor Documentation

AmrYtWriter()

AmrYtWriter::AmrYtWriter ( int step, int bin = 0 )

explicit

Parameters

step	we write
bin	energy bin we write (multi-bunch simulation)

Definition at line 40 of file AmrYtWriter.cpp.

References IpplInfo::Comm, dir_m, OpalData::getAuxiliaryOutputDirectory(), OpalData::getInputBasename(), OpalData::getInstance(), intData_m, IpplInfo::myNode(), and realData_m.

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Member Function Documentation

writeBunch()

void AmrYtWriter::writeBunch ( const AmrPartBunch * bunch_p, const double & time, const double & scale )

virtual

Parameters

bunch_p
time
scale	used for mapping

Implements AbstractAmrWriter.

Definition at line 297 of file AmrYtWriter.cpp.

References allreduce(), IpplInfo::Comm, dir_m, BoxLibLayout< T, Dim >::finestLevel(), AmrParticleBase< PLayout >::getAmrLayout(), AmrPartBunch::getAmrParticleBase(), PartBunchBase< T, Dim >::getLayout(), AmrParticleBase< PLayout >::getLocalNumPerLevel(), PartBunchBase< T, Dim >::getTotalNum(), intData_m, IpplInfo::myNode(), realData_m, where(), and writeParticles_m().

Referenced by AmrBoxLib::computeSelfFields_cycl(), and AmrBoxLib::computeSelfFields_cycl().

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writeFields()

void AmrYtWriter::writeFields ( const amr::AmrScalarFieldContainer_t & rho, const amr::AmrScalarFieldContainer_t & phi, const amr::AmrVectorFieldContainer_t & efield, const amr::AmrIntArray_t & refRatio, const amr::AmrGeomContainer_t & geom, const int & nLevel, const double & time, const double & scale )

virtual

Write yt files to the simulation subdirectory data/amr/yt. The data can be visualized using the python script pyOPALTools/amrPlots/visualize.py. Use the help to find out how to call the script.

Implements AbstractAmrWriter.

Definition at line 93 of file AmrYtWriter.cpp.

References IpplInfo::Comm, dir_m, and IpplInfo::myNode().

Referenced by AmrBoxLib::computeSelfFields_cycl(), and AmrBoxLib::computeSelfFields_cycl().

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writeParticles_m()

void AmrYtWriter::writeParticles_m ( int level, std::ofstream & ofs, int fnum, amrex::Vector< int > & which, amrex::Vector< int > & count, amrex::Vector< long > & where, const AmrPartBunch * bunch_p, const double gamma ) const

private

Definition at line 553 of file AmrYtWriter.cpp.

References AmrParticleLevelCounter< Key, T, Compare, Allocator >::begin(), PartBunchBase< T, Dim >::Bf, PartBunchBase< T, Dim >::Bin, PartBunchBase< T, Dim >::dt, PartBunchBase< T, Dim >::Ef, AmrPartBunch::getAmrParticleBase(), OpalData::getInstance(), PartBunchBase< T, Dim >::getLayout(), AmrParticleBase< PLayout >::getLocalNumPerLevel(), AmrParticleBase< PLayout >::Grid, PartBunchBase< T, Dim >::ID, intData_m, PartBunchBase< T, Dim >::M, IpplInfo::myNode(), PartBunchBase< T, Dim >::P, PartBunchBase< T, Dim >::Q, PartBunchBase< T, Dim >::R, realData_m, and where().

Referenced by writeBunch().

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Member Data Documentation

dir_m

std::string AmrYtWriter::dir_m

private

directory where to write files

Definition at line 84 of file AmrYtWriter.h.

Referenced by AmrYtWriter(), writeBunch(), and writeFields().

intData_m

std::vector<std::string> AmrYtWriter::intData_m

private

integer bunch data

Definition at line 85 of file AmrYtWriter.h.

Referenced by AmrYtWriter(), writeBunch(), and writeParticles_m().

realData_m

std::vector<std::string> AmrYtWriter::realData_m

private

real bunch data

Definition at line 86 of file AmrYtWriter.h.

Referenced by AmrYtWriter(), writeBunch(), and writeParticles_m().

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The documentation for this class was generated from the following files:

• AmrYtWriter.h
• AmrYtWriter.cpp